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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37987589_37988437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37987589 - 37988437

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTCTTCTGATCT

Flanking Amino Acid:

LLTNQKHAMHGFFIPGFPKL

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

75.2

40.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.81

0.6

82.1

22.6

Minor 5ss

-1.6

3.3

45.6

43.8

Minor BPS

54.2

0.21

1.8

71.9

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042767

37956983 - 37994406

37424

ENSAPLT00000009963

37932030 - 37994406

62377