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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37988533_37990197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37988533 - 37990197

Intron Length:

1665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGCTCTT

5'SS Class:

major

3'SS Sequence:

TGTCTCGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

CCTGCTGAAACA

Flanking Amino Acid:

KLFPKLKKHMDKEQMTTGIY

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.37

1.2

65.4

Major BPS

0.42

1.1

57.3

41.7

Major PPT

69.8

0.45

0.9

61.8

39.9

Minor 5ss

44.4

-0.6

3.3

42.7

Minor BPS

-0.5

2.3

53.6

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042767

37956983 - 37994406

37424

ENSAPLT00000009963

37932030 - 37994406

62377