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Intron Name: Anas_platyrhynchos_platyrhynchos_5_37991385_37992557_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37991385 - 37992557

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTTCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTGCTCTCACCC

Flanking Amino Acid:

MAYTILKLHKKRLLKMTLED

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

77.6

32.3

Major BPS

72.7

0.56

30.1

Major PPT

74.1

0.54

0.8

68.6

31.7

Minor 5ss

35.7

-1.6

3.2

45.3

36.6

Minor BPS

46.5

-0.2

1.8

55.21

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042767

37956983 - 37994406

37424

ENSAPLT00000009963

37932030 - 37994406

62377