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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38008893_38010827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38008893 - 38010827

Intron Length:

1935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCAAT

5'SS Class:

major

3'SS Sequence:

TTCTTTTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTGTATGAATA

Flanking Amino Acid:

PFMKLVSKIQVPDYYDIIKK

Intron Amino Acid Position:

1453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

1.1

77.9

38.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

78.8

0.65

81.4

27.9

Minor 5ss

46.6

-0.3

2.7

45.2

Minor BPS

51.9

0.06

1.8

68.84

37.7

Associated Gene:

Gene:

BAZ1A

Ensembl Gene ID:

ENSAPLG00000009786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010234

38008138 - 38070056

61919