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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38014224_38021775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38014224 - 38021775

Intron Length:

7552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCGTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTTCTTCTCCT

Flanking Amino Acid:

IERRFLKAPLDASDGGRSYK

Intron Amino Acid Position:

1084

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

80.5

34.9

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

68.5

0.42

64.4

36.6

Minor 5ss

49.9

-0

2.8

70.4

41.2

Minor BPS

42.4

-0.5

3.7

80.12

Associated Gene:

Gene:

BAZ1A

Ensembl Gene ID:

ENSAPLG00000009786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010234

38008138 - 38070056

61919