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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38038756_38041902_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38038756 - 38041902

Intron Length:

3147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAATGACA

5'SS Class:

major

3'SS Sequence:

ATAAAAAGATCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ACTTTTTCAAAT

Flanking Amino Acid:

PPKKASISHVIYLSTCFFLS

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

67.9

36.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

48.8

-0

1.1

42.7

45.5

Minor 5ss

34.3

-1.8

3.1

41.4

38.9

Minor BPS

55.3

0.25

1.6

71.21

39.9

Associated Gene:

Gene:

BAZ1A

Ensembl Gene ID:

ENSAPLG00000009786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010234

38008138 - 38070056

61919