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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38042042_38042756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38042042 - 38042756

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTACTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATCTCTTTTACT

Flanking Amino Acid:

EPHDGVIKTKATSIAKYNLA

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.3

34.3

Major BPS

100

1.24

0.5

100

Major PPT

0.43

74.9

32.7

Minor 5ss

34.4

-1.8

2.8

41.5

45.1

Minor BPS

68.8

0.67

1.6

82.04

39.4

Associated Gene:

Gene:

BAZ1A

Ensembl Gene ID:

ENSAPLG00000009786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010234

38008138 - 38070056

61919