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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38044259_38047760_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38044259 - 38047760

Intron Length:

3502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

AACCTTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTTCTTTAACC

Flanking Amino Acid:

SETHNSSAQNGKKKAIIDPS

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.4

32.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

75.8

0.58

0.8

73.5

Minor 5ss

33.9

-1.8

3.3

40.8

45.4

Minor BPS

91.5

1.28

0.7

94.26

Associated Gene:

Gene:

BAZ1A

Ensembl Gene ID:

ENSAPLG00000009786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010234

38008138 - 38070056

61919