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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38104055_38105542_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38104055 - 38105542

Intron Length:

1488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTCATTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTGTGTTAATT

Flanking Amino Acid:

SLKDLLSKLQTDIQLSQWVV

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

25.9

Major BPS

100

1.24

0.5

100

Major PPT

82.6

0.73

0.9

80.3

37.1

Minor 5ss

41.5

-0.9

2.7

53.7

43.5

Minor BPS

55.9

0.26

2.1

77.24

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036669

38103938 - 38118599

14662

ENSAPLT00000010523

38103938 - 38118724

14787