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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38105624_38107051_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38105624 - 38107051

Intron Length:

1428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTTTGTTGT

5'SS Class:

weak_major

3'SS Sequence:

CAGAGCTTGGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTGCTTTTAAAT

Flanking Amino Acid:

TQASLLQKADFIACNVKKRG

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.2

65.6

40.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

43.9

-0.3

1.7

42.4

42.8

Minor 5ss

46.8

-0.3

2.5

63.8

40.8

Minor BPS

58.2

0.34

1.4

69.73

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036669

38103938 - 38118599

14662

ENSAPLT00000010523

38103938 - 38118724

14787