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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38114376_38115449_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38114376 - 38115449

Intron Length:

1074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

CTTTTTTAGATT

Flanking Amino Acid:

FNLEHLAMQKMHQHPLPMVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

79.2

0.72

Major PPT

91.4

0.93

0.6

91.5

19.8

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

54.5

0.22

1.7

73.17

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036669

38103938 - 38118599

14662

ENSAPLT00000010523

38103938 - 38118724

14787