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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38115564_38118649_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38115564 - 38118649

Intron Length:

3086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGAGCTG

5'SS Class:

weak_major

3'SS Sequence:

TGACTTTGATGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTGTTTTGATT

Flanking Amino Acid:

GCAACLASTMLVVTHNEVVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.17

1.1

46.4

43.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

47.9

-0.1

1.8

58.7

Minor 5ss

-2.6

3.6

33.9

44.2

Minor BPS

66.4

0.6

1.3

81.5

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010523

38103938 - 38118724

14787