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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38125075_38126476_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38125075 - 38126476

Intron Length:

1402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTAAC

5'SS Class:

major

3'SS Sequence:

TTATACTCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTCTTTTATA

Flanking Amino Acid:

LSNATIINEEVLNAMLKEVC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

75.2

34.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

64.1

0.32

1.1

64.1

36.6

Minor 5ss

38.5

-1.3

2.4

45.6

42.6

Minor BPS

72.9

0.71

1.5

82.82

31.5

Associated Gene:

Gene:

SRP54

Ensembl Gene ID:

ENSAPLG00000010125

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010605

38124961 - 38136110

11150