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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38128283_38129455_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38128283 - 38129455

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TTTCTTTTAACA

Flanking Amino Acid:

GSGKTTTCSKLAYFYQRKGW

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.1

73.2

39.3

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

87.2

0.84

0.8

84.6

28.7

Minor 5ss

46.1

-0.4

2.6

62.1

42.6

Minor BPS

78.7

0.9

84.25

28.8

Associated Gene:

Gene:

SRP54

Ensembl Gene ID:

ENSAPLG00000010125

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010605

38124961 - 38136110

11150