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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38130518_38131355_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38130518 - 38131355

Intron Length:

838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

CTTTTCCTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAACAAT

U12 Branch Point Sequence:

AAAGCAGGAAAC

Flanking Amino Acid:

EEMLQVANAIQPDNIVYVMD

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

72.6

38.2

Major BPS

49.4

-0

1.3

57.1

35.8

Major PPT

80.4

0.68

0.7

73.6

31.4

Minor 5ss

34.6

-1.8

2.9

48.3

41.7

Minor BPS

36.2

-1

2.1

42.71

Associated Gene:

Gene:

SRP54

Ensembl Gene ID:

ENSAPLG00000010125

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010605

38124961 - 38136110

11150