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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38133156_38133545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38133156 - 38133545

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

CCTTTGCTAATT

Flanking Amino Acid:

NEALIEKLKHGQFTLRDMYE

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

81.3

0.7

0.9

78.1

40.1

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

46.7

-0.1

2.3

67.26

44.4

Associated Gene:

Gene:

SRP54

Ensembl Gene ID:

ENSAPLG00000010125

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010605

38124961 - 38136110

11150