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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38133970_38134758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38133970 - 38134758

Intron Length:

789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTAATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TCTGCTGTAATT

Flanking Amino Acid:

MTIMDSMNDQELDSTDGAKV

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

70.9

0.47

62.9

42.1

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

0.2

2.1

74.65

43.4

Associated Gene:

Gene:

SRP54

Ensembl Gene ID:

ENSAPLG00000010125

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010605

38124961 - 38136110

11150