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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38165330_38167776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38165330 - 38167776

Intron Length:

2447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTACACTAAAT

Flanking Amino Acid:

MQFFNYVMRKVWLHQTRIGL

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

35.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

88.6

0.87

0.7

83.9

31.1

Minor 5ss

35.9

-1.6

2.6

42.1

44.4

Minor BPS

52.9

0.17

2.1

80.8

39.8

Associated Gene:

Gene:

PPP2R3C

Ensembl Gene ID:

ENSAPLG00000010576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011039

38157819 - 38170949

13131