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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38177182_38189572_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38177182 - 38189572

Intron Length:

12391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTTTCTTTATTT

Flanking Amino Acid:

TDTFRKTSPQEFEAFQTFVE

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.8

38.5

Major BPS

83.9

0.84

73.9

41.3

Major PPT

90.2

0.9

0.7

89.1

26.1

Minor 5ss

38.8

-1.3

3.4

58.1

46.5

Minor BPS

69.3

0.68

1.6

83.14

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011224

38171475 - 38216753

45279