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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38189681_38212935_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38189681 - 38212935

Intron Length:

23255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGGAA

U12 Branch Point Sequence:

AGCTAAGGAAAT

Flanking Amino Acid:

IKPRKSQCENLFEAVNCLAK

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

47.1

-0.1

1.3

43.7

39.2

Major PPT

0.88

0.7

29.8

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

36.2

-0.9

2.2

51.98

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011224

38171475 - 38216753

45279