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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38224227_38225162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38224227 - 38225162

Intron Length:

936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

TTCTTCTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATCTAT

U12 Branch Point Sequence:

ATATCTATGACA

Flanking Amino Acid:

AVIVTQKKVPDKLLDSNTVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

77.4

33.6

Major BPS

0.4

1.3

64.8

42.4

Major PPT

0.81

0.6

85.4

Minor 5ss

46.7

-0.3

2.8

68.1

42.7

Minor BPS

59.9

0.3

1.6

70.41

35.1

Associated Gene:

Gene:

PSMA6

Ensembl Gene ID:

ENSAPLG00000010919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011378

38221085 - 38231205

10121