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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38309230_38329477_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

38309230 - 38329477

Intron Length:

20248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TTGGCTAAACCAG|T

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TGTTCCTTAATT

Flanking Amino Acid:

LKSLIPLYQNFYEERARYLQ

Intron Amino Acid Position:

1992

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.2

57.1

42.4

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

60.4

0.24

1.1

53.1

Minor 5ss

98.8

1.64

0.5

12.5

Minor BPS

1.33

0.8

96.98

27.6

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025115

38299610 - 38426660

127051

ENSAPLT00000023971

38299610 - 38426660

127051

ENSAPLT00000011696

38299610 - 38426660

127051