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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38340353_38341668_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38340353 - 38341668

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATTCT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

CTGTGTTTTACA

Flanking Amino Acid:

RELRNLDSRQCRETHKIAVF

Intron Amino Acid Position:

1803

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

76.5

32.9

Major BPS

72.5

0.56

1.2

39.9

Major PPT

81.8

0.71

0.9

75.6

38.3

Minor 5ss

42.3

-0.8

2.9

56.2

43.3

Minor BPS

48.9

-0

2.1

62.29

44.3

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011696

38299610 - 38426660

127051

ENSAPLT00000025115

38299610 - 38426660

127051

ENSAPLT00000023971

38299610 - 38426660

127051