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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38368496_38370069_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38368496 - 38370069

Intron Length:

1574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTGCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TCCTCTTGCAAG

Flanking Amino Acid:

MHCGLLHVDQDIVNTIIKHC

Intron Amino Acid Position:

1184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

67.6

0.44

1.2

Major PPT

66.4

0.37

1.1

67.2

38.3

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

-0.6

48.72

45.1

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025115

38299610 - 38426660

127051

ENSAPLT00000023971

38299610 - 38426660

127051

ENSAPLT00000011696

38299610 - 38426660

127051