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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38370226_38370328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38370226 - 38370328

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTAAAACTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTTTCTAAAACT

Flanking Amino Acid:

LRILTPWLFKATMLTDKYKQ

Intron Amino Acid Position:

1132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.2

33.8

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

64.1

0.32

56.6

38.5

Minor 5ss

43.2

-0.7

2.9

57.8

46.8

Minor BPS

64.6

0.54

1.9

88.67

36.3

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025115

38299610 - 38426660

127051

ENSAPLT00000023971

38299610 - 38426660

127051

ENSAPLT00000011696

38299610 - 38426660

127051