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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38370428_38370552_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38370428 - 38370552

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATGATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATGATT

Flanking Amino Acid:

LCELWQNLAKIRDNLGISTD

Intron Amino Acid Position:

1099

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

73.7

30.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.5

0.69

0.9

74.2

40.1

Minor 5ss

29.1

-2.4

3.4

37.8

Minor BPS

62.2

0.47

1.5

82.94

31.9

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025115

38299610 - 38426660

127051

ENSAPLT00000023971

38299610 - 38426660

127051

ENSAPLT00000011696

38299610 - 38426660

127051