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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38370747_38372271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38370747 - 38372271

Intron Length:

1525

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCAGTATCT

5'SS Class:

major

3'SS Sequence:

TCTTCCATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TTTTCTTCCATT

Flanking Amino Acid:

HSVLQTPDDLETSEFPSECC

Intron Amino Acid Position:

1034

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.2

63.6

42.2

Major BPS

69.8

0.49

37.5

Major PPT

83.4

0.75

0.8

77.1

30.1

Minor 5ss

28.9

-2.4

4.2

48.3

47.3

Minor BPS

59.7

0.39

83.73

37.9

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023971

38299610 - 38426660

127051

ENSAPLT00000011696

38299610 - 38426660

127051