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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38372425_38375618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38372425 - 38375618

Intron Length:

3194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAGTAG

5'SS Class:

major

3'SS Sequence:

ATTGCATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

TTTAAGGTAACT

Flanking Amino Acid:

PLSAEAATITGSESASPIQS

Intron Amino Acid Position:

983

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

61.6

39.4

Major BPS

75.6

0.64

1.5

34.5

Major PPT

77.6

0.62

0.9

70.4

39.6

Minor 5ss

35.6

-1.6

3.4

42.7

46.8

Minor BPS

-0.2

2.7

77.66

44.4

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011696

38299610 - 38426660

127051

ENSAPLT00000023971

38299610 - 38426660

127051