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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38375796_38376922_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38375796 - 38376922

Intron Length:

1127

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTCAGTTAATA

Flanking Amino Acid:

AFQYDGRKFENFSFGTEAGT

Intron Amino Acid Position:

924

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

1.1

87.1

27.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.2

0.63

0.8

72.7

31.1

Minor 5ss

30.7

-2.2

3.9

42.6

38.4

Minor BPS

49.5

-0

2.2

66.77

39.5

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025115

38299610 - 38426660

127051

ENSAPLT00000011696

38299610 - 38426660

127051