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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38376069_38376922_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38376069 - 38376922

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TATTCTCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTACTTTATT

Flanking Amino Acid:

AFQYDGRKFESTLTATKQNT

Intron Amino Acid Position:

924

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

1.1

87.1

27.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

76.4

0.59

0.9

75.1

34.6

Minor 5ss

30.7

-2.2

3.9

42.6

38.4

Minor BPS

0.68

1.8

89.22

35.1

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023971

38299610 - 38426660

127051