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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38377140_38379503_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38377140 - 38379503

Intron Length:

2364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCAATGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

GTCTCTTCAATG

Flanking Amino Acid:

AERLRSGSALNVTRRGSSPG

Intron Amino Acid Position:

852

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

68.6

0.42

66.2

39.5

Minor 5ss

43.9

-0.7

3.2

62.5

43.1

Minor BPS

57.5

0.1

1.6

59.97

42.5

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025115

38299610 - 38426660

127051

ENSAPLT00000023971

38299610 - 38426660

127051

ENSAPLT00000011696

38299610 - 38426660

127051