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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38383106_38391570_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38383106 - 38391570

Intron Length:

8465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TTTTTCCTACAG

Flanking Amino Acid:

ARSIVRQKTVDIDDAQILPR

Intron Amino Acid Position:

754

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

78.1

36.4

Major BPS

73.9

0.59

30.2

Major PPT

89.5

0.89

0.6

84.3

23.8

Minor 5ss

39.4

-1.2

50.9

40.1

Minor BPS

-0.2

2.1

64.91

42.8

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025115

38299610 - 38426660

127051

ENSAPLT00000023971

38299610 - 38426660

127051

ENSAPLT00000011696

38299610 - 38426660

127051