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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38391733_38393727_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38391733 - 38393727

Intron Length:

1995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TCTATTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TAGTAGTGAATA

Flanking Amino Acid:

EQKQKKHKGKGVGHEFPKSS

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

76.9

33.7

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

88.7

0.87

0.7

84.1

30.7

Minor 5ss

31.3

-2.1

38.6

46.4

Minor BPS

45.3

-0.3

2.2

58.43

41.2

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023971

38299610 - 38426660

127051

ENSAPLT00000011696

38299610 - 38426660

127051

ENSAPLT00000025115

38299610 - 38426660

127051