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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38410298_38411895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38410298 - 38411895

Intron Length:

1598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTAATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

LINPPLNVQETQVTIEEITP

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

62.2

0.3

1.1

68.9

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011696

38299610 - 38426660

127051

ENSAPLT00000025115

38299610 - 38426660

127051

ENSAPLT00000023971

38299610 - 38426660

127051