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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38412074_38413000_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38412074 - 38413000

Intron Length:

927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTGAA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

TTTGGCCAAACT

Flanking Amino Acid:

KLLHTGNSLKIRREGVRLFL

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

72.2

32.5

Major BPS

0.45

0.9

67.6

25.3

Major PPT

84.9

0.78

0.9

90.5

22.3

Minor 5ss

38.2

-1.3

3.1

49.1

47.1

Minor BPS

46.9

-0.1

2.4

76.24

46.2

Associated Gene:

Gene:

RALGAPA1

Ensembl Gene ID:

ENSAPLG00000011153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025115

38299610 - 38426660

127051

ENSAPLT00000023971

38299610 - 38426660

127051

ENSAPLT00000011696

38299610 - 38426660

127051