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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38443701_38446240_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38443701 - 38446240

Intron Length:

2540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGTGCTA

5'SS Class:

weak_major

3'SS Sequence:

CTTTTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

AAATGCCTAATT

Flanking Amino Acid:

EIQASRQHCESEKLLLYDTV

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.18

1.3

54.5

Major BPS

74.5

0.61

79.6

29.1

Major PPT

89.4

0.89

0.6

88.9

20.3

Minor 5ss

29.4

-2.4

3.4

39.2

Minor BPS

49.6

0.05

2.1

69.47

41.2

Associated Gene:

Gene:

BRMS1L

Ensembl Gene ID:

ENSAPLG00000012253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012788

38433406 - 38452190

18785