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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38448077_38449440_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38448077 - 38449440

Intron Length:

1364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGCTGATGAACT

Flanking Amino Acid:

ILEDWTTIRKAMATLGPHRV

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.5

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

67.1

0.39

1.2

63.8

46.3

Minor 5ss

-1.2

3.1

47.6

42.4

Minor BPS

48.5

-0

2.1

70.98

45.3

Associated Gene:

Gene:

BRMS1L

Ensembl Gene ID:

ENSAPLG00000012253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012788

38433406 - 38452190

18785