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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38449481_38450291_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38449481 - 38450291

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGGTCATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGATGTTAAAT

Flanking Amino Acid:

TLGPHRVKPEPPVKLEKHLH

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

83.2

30.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.9

0.63

0.9

74.5

Minor 5ss

36.4

-1.5

2.7

41.6

38.3

Minor BPS

50.1

0.08

2.2

73.39

43.4

Associated Gene:

Gene:

BRMS1L

Ensembl Gene ID:

ENSAPLG00000012253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012788

38433406 - 38452190

18785