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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38450419_38452066_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38450419 - 38452066

Intron Length:

1648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATTT

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TCTCCCTGACCC

Flanking Amino Acid:

CIDKKDECPTSAIITTINHD

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

27.7

Major BPS

0.5

1.1

71.2

35.2

Major PPT

81.2

0.7

0.8

77.5

Minor 5ss

43.2

-0.7

3.3

64.8

46.5

Minor BPS

56.4

0.18

1.8

68.78

42.5

Associated Gene:

Gene:

BRMS1L

Ensembl Gene ID:

ENSAPLG00000012253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012788

38433406 - 38452190

18785