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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38553601_38554568_R

Intron Information:

Intron Rank:

132900

Intron Class:

major

Intron Phase:

Intron Coordinates:

38553601 - 38554568

Intron Length:

968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TATTGGCCCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

ATTTCCTGTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.7

89.2

17.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

66.6

0.37

0.9

63.1

39.2

Minor 5ss

36.4

-1.5

2.9

48.7

47.5

Minor BPS

0.52

1.8

83.33

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040918

38553439 - 38557238

3800

ENSAPLT00000031371

38552685 - 38555155

2471