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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38557679_38562929_F

Intron Information:

Intron Rank:

124526

Intron Class:

major

Intron Phase:

Intron Coordinates:

38557679 - 38562929

Intron Length:

5251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.4

33.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.2

0.66

79.5

32.8

Minor 5ss

-1.6

2.6

43.2

43.8

Minor BPS

62.5

0.47

1.8

84.55

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042235

38557535 - 38563270

5736