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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38575943_38577074_R

Intron Information:

Intron Rank:

140257

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38575943 - 38577074

Intron Length:

1132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCTCAGC

5'SS Class:

weak_major

3'SS Sequence:

TTCCTCCCATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGCTTCTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.3

52.2

44.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

75.8

0.58

0.8

74.8

28.9

Minor 5ss

35.1

-1.7

2.9

44.9

42.5

Minor BPS

77.4

0.94

1.1

83.97

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022030

38575187 - 38588680

13494