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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38577201_38588064_R

Intron Information:

Intron Rank:

140258

Intron Class:

major

Intron Phase:

Intron Coordinates:

38577201 - 38588064

Intron Length:

10864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.4

33.3

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

87.9

0.85

0.6

81.4

30.6

Minor 5ss

36.4

-1.5

3.4

49.2

47.3

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022030

38575187 - 38588680

13494

ENSAPLT00000036021

38575167 - 38588680

13514