Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_38626855_38628337_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38626855 - 38628337

Intron Length:

1483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGGC

5'SS Class:

strong_major

3'SS Sequence:

ATTATTTATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TATTATTTATTT

Flanking Amino Acid:

EFCNVIDCNQENSCARTDAI

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.1

70.6

41.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

76.1

0.59

0.9

74.9

39.5

Minor 5ss

38.6

-1.3

3.2

44.2

Minor BPS

59.3

0.37

1.7

77.93

38.7

Associated Gene:

Gene:

MBIP

Ensembl Gene ID:

ENSAPLG00000012769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038496

38619912 - 38630750

10839

ENSAPLT00000013305

38619912 - 38633653

13742