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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38628754_38630477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38628754 - 38630477

Intron Length:

1724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTGTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TCCCCTTTAACT

Flanking Amino Acid:

ALQQHILCLQPLLEKLQPLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

84.2

33.9

Major BPS

77.3

0.68

79.3

29.4

Major PPT

91.8

0.94

0.8

92.3

26.6

Minor 5ss

44.7

-0.6

3.1

45.2

Minor BPS

0.83

1.2

80.9

41.2

Associated Gene:

Gene:

MBIP

Ensembl Gene ID:

ENSAPLG00000012769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038496

38619912 - 38630750

10839

ENSAPLT00000013305

38619912 - 38633653

13742