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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38640555_38644512_F

Intron Information:

Intron Rank:

128658

Intron Class:

major

Intron Phase:

Intron Coordinates:

38640555 - 38644512

Intron Length:

3958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTCCT

5'SS Class:

major

3'SS Sequence:

CCTTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

ATCTCCTGACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

42.9

Major BPS

68.9

0.47

59.2

39.1

Major PPT

84.3

0.77

0.7

80.7

24.6

Minor 5ss

48.5

-0.1

2.5

68.9

41.6

Minor BPS

48.2

-0.2

1.9

55.99

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025135

38635075 - 38645547

10473