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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38640555_38671110_F

Intron Information:

Intron Rank:

128646

Intron Class:

major

Intron Phase:

Intron Coordinates:

38640555 - 38671110

Intron Length:

30556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTCCT

5'SS Class:

major

3'SS Sequence:

TCTTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

AGACAAACAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

42.9

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

91.2

0.93

0.6

84.1

30.8

Minor 5ss

48.5

-0.1

2.5

68.9

41.6

Minor BPS

37.7

-0.9

1.9

45.71

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023745

38639682 - 38677068

37387

ENSAPLT00000017877

38633709 - 38673829

40121