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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38642059_38643085_F

Intron Information:

Intron Rank:

128648

Intron Class:

major

Intron Phase:

Intron Coordinates:

38642059 - 38643085

Intron Length:

1027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTATTCTGGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATTTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.1

0.39

1.1

65.4

40.9

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

75.3

0.87

82.84

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019994

38641889 - 38646600

4712

ENSAPLT00000030371

38641889 - 38645547

3659

ENSAPLT00000020630

38641889 - 38649932

8044