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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38643159_38644512_F

Intron Information:

Intron Rank:

128651

Intron Class:

major

Intron Phase:

Intron Coordinates:

38643159 - 38644512

Intron Length:

1354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

ATCTCCTGACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

68.9

0.47

59.2

39.1

Major PPT

84.3

0.77

0.7

80.7

24.6

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

48.2

-0.2

1.9

55.99

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020630

38641889 - 38649932

8044

ENSAPLT00000042987

38639682 - 38649932

10251

ENSAPLT00000030371

38641889 - 38645547

3659