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Intron Name: Anas_platyrhynchos_platyrhynchos_5_38643159_38646198_F

Intron Information:

Intron Rank:

128649

Intron Class:

major

Intron Phase:

Intron Coordinates:

38643159 - 38646198

Intron Length:

3040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTCCCTCTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.9

0.67

0.8

73.6

31.4

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

43.6

-0.4

3.7

84.68

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019994

38641889 - 38646600

4712